The User Interface

The BioImage window consists of three panes, from left to right:

Processing Pane

The Processing Pane is used to load, orient, and filter data. See item 1 in Figure 1.1.

Visualization Pane

The Visualization pane as shown in item 2 of Figure 1.1, contains four sub-panes. The top pane displays three dimensional visualizations. The bottom three panes (left to right) display coronal, axial, and sagittal slice planes.

Visualization Settings Pane

The Visualization Settings Pane is used to modify settings controlling two and three dimensional visualizations. See item 3 in Figure 2.2.

Panes can be detached from each other by clicking on the vertical dashed lines separating the panes.