The Insight Toolkit (ITK) is an open-source software library for performing segmentation and registration. When the ITK toolkit is present, and SCIRun is appropriately configured, ITK filters are encapsulated in SCIRun modules for use in SCIRun networks. By default, SCIRun encapsulates a subset of ITK filters.

SCIRun encapsulates ITK filters using XML-based description files. An XSLT processor generates code for SCIRun modules from the XML descriptions and XSL stylesheets. Users may encapsulate additional filters by writing XML descriptions of them. See the SCIRun Users Guide for more information.

For an sh-type shell:

PATH=$JAVA_HOME/bin:$PATH
      

and for a csh-type shell:

setenv PATH $JAVA_HOME/bin:$PATH