Two SCIRun Problem Solving Environments (PSE), BioPSE and Fusion, are available via RPMs. RPMs are available for each supported Linux distribution. Customized SCIRun PSEs can be built from source code, see “Installation from Source Code”
The BioPSE RPM includes SCIRun packages BioPSE, MatlabInterface, Teem, and Insight. The BioPSE RPM includes ITK libraries required by the Insight package. Matlab software must be present to use modules of the MatlabInterface package.
The Fusion RPM includes SCIRun packages Fusion, DataIO, and Teem. The Fusion RPM includes the HDF5 libraries. The SCIRun/Fusion RPM has been built to use MDSplus software but MDSplus software must be installed separately. See “MDSplus Installation” for MDSplus software installation instructions.
The version of SCIRun included in all RPMs has been configured to support BLAS but BLAS libraries must be installed separately. See “ BLAS (or ATLAS), and LAPACK Installation ” for BLAS installation instructions (BLAS/ATLAS and LAPACK are often pre-installed in Linux distributions).
Root privileges are required to install the SCIRun
RPMs. SCIRun is installed in
/usr/local/SCIRun/bin.
Follow these steps to install SCIRun:
Be sure to read “Before Starting SCIRun” after installing, but before starting, SCIRun.
From SCI's software archive page download the following files:
SCIRunBioPSE-1.24.2- or
system.rpmSCIRunFusion-1.24.2-
system.rpm
Above, system is the Linux
system of interest.
SCIRunData.1.24.0b_to_1.24.1.tar.gz
if updating an existing
SCIRunData/1.24.0b directory.
SCIRunData.1.24.2.tar.gz, which contains all datasets for
SCIRun 1.24.2.
FusionData.1.24.2.tar.gz for Fusion users.
SCIRunDocs.1.24.2.tar.gz